Neurethic - Contributions [fr]

Welcome Guide

2026-03-24T14:19:50Z

Pierre.demangel : Add Introduction

__NOTOC__

The Neurethic Lab team bids you a warm welcome.

This Welcome Guide is designed so that you can easily and comfortably start working. It features a list of all the software you will probably need, so that you do not have to worry about forgetting any of them.

You can read about each software by clicking on its name, or be taken directly to their download page by clicking on direct links.

== What you will probably need ==

=== Bookmarked in your browser ===
* [[GitLab]] ([https://gitlab.neurethic.com direct link])
* [[JupyterLab]] ([https://jupyter.neurethic.com/ direct link])
* [[Nextcloud Hub]] ([https://nextcloud.neurethic.com/ direct link])
* [[Snipe-IT]] ([https://snipe.neurethic.com/ direct link])

=== Installed on your PC/Laptop ===

* [[Element]] ([https://element.io/download direct link])
* [[Git]] ([https://git-scm.com/install/ direct link])
* An IDE (''e.g.'' [[Visual Studio Code]] ([https://code.visualstudio.com/Download direct link]))
* [[Nextcloud Hub]] ([https://nextcloud.com/install direct link])
* [[Obsidian]] ([https://obsidian.md/download direct link])
* [[PsychoPy]] ([https://www.psychopy.org/download.html direct link])
* [[Python]] ([https://www.python.org/downloads/ direct link])
* [[Zoom]] ([https://zoom.us/download direct link])

=== Installed on your smartphone ===

* [[Element]]
* [[Nextcloud Hub]]
* [[Zoom]]

[[Fichier:Qrcode_Element_Install_Phone.png|150px|gauche|vignette|Qr Code to https://element.io/download]]
[[Fichier:Qrcode_Nextcloud_Install_Phone.png|150px|droite|vignette|Qr Code to https://nextcloud.com/install]]
[[Fichier:Qrcode_Zoom_Install_Phone.png|150px|center|vignette|Qr Code to https://zoom.com/download]]

Welcome Guide

2026-03-23T16:08:41Z

Pierre.demangel : Remove unwanted space before first heading

__NOTOC__
== What you will probably need ==

=== Bookmarked in your browser ===
* [[GitLab]] ([https://gitlab.neurethic.com direct link])
* [[JupyterLab]] ([https://jupyter.neurethic.com/ direct link])
* [[Nextcloud Hub]] ([https://nextcloud.neurethic.com/ direct link])
* [[Snipe-IT]] ([https://snipe.neurethic.com/ direct link])

=== Installed on your PC/Laptop ===

* [[Element]] ([https://element.io/download direct link])
* [[Git]] ([https://git-scm.com/install/ direct link])
* An IDE (''e.g.'' [[Visual Studio Code]] ([https://code.visualstudio.com/Download direct link]))
* [[Nextcloud Hub]] ([https://nextcloud.com/install direct link])
* [[Obsidian]] ([https://obsidian.md/download direct link])
* [[PsychoPy]] ([https://www.psychopy.org/download.html direct link])
* [[Python]] ([https://www.python.org/downloads/ direct link])
* [[Zoom]] ([https://zoom.us/download direct link])

=== Installed on your smartphone ===

* [[Element]]
* [[Nextcloud Hub]]
* [[Zoom]]

[[Fichier:Qrcode_Element_Install_Phone.png|150px|gauche|vignette|Qr Code to https://element.io/download]]
[[Fichier:Qrcode_Nextcloud_Install_Phone.png|150px|droite|vignette|Qr Code to https://nextcloud.com/install]]
[[Fichier:Qrcode_Zoom_Install_Phone.png|150px|center|vignette|Qr Code to https://zoom.com/download]]

Welcome Guide

2026-03-23T16:06:33Z

Pierre.demangel : Remove Table of Content

__NOTOC__

== What you will probably need ==

=== Bookmarked in your browser ===
* [[GitLab]] ([https://gitlab.neurethic.com direct link])
* [[JupyterLab]] ([https://jupyter.neurethic.com/ direct link])
* [[Nextcloud Hub]] ([https://nextcloud.neurethic.com/ direct link])
* [[Snipe-IT]] ([https://snipe.neurethic.com/ direct link])

=== Installed on your PC/Laptop ===

* [[Element]] ([https://element.io/download direct link])
* [[Git]] ([https://git-scm.com/install/ direct link])
* An IDE (''e.g.'' [[Visual Studio Code]] ([https://code.visualstudio.com/Download direct link]))
* [[Nextcloud Hub]] ([https://nextcloud.com/install direct link])
* [[Obsidian]] ([https://obsidian.md/download direct link])
* [[PsychoPy]] ([https://www.psychopy.org/download.html direct link])
* [[Python]] ([https://www.python.org/downloads/ direct link])
* [[Zoom]] ([https://zoom.us/download direct link])

=== Installed on your smartphone ===

* [[Element]]
* [[Nextcloud Hub]]
* [[Zoom]]

[[Fichier:Qrcode_Element_Install_Phone.png|150px|gauche|vignette|Qr Code to https://element.io/download]]
[[Fichier:Qrcode_Nextcloud_Install_Phone.png|150px|droite|vignette|Qr Code to https://nextcloud.com/install]]
[[Fichier:Qrcode_Zoom_Install_Phone.png|150px|center|vignette|Qr Code to https://zoom.com/download]]

Newcomer Guide

2026-03-23T15:52:22Z

Pierre.demangel : Pierre.demangel a déplacé la page Newcomer Guide vers Welcome Guide

#REDIRECTION [[Welcome Guide]]

Welcome Guide

2026-03-23T15:52:22Z

Pierre.demangel : Pierre.demangel a déplacé la page Newcomer Guide vers Welcome Guide

== What you will probably need ==

=== Bookmarked in your browser ===
* [[GitLab]] ([https://gitlab.neurethic.com direct link])
* [[JupyterLab]] ([https://jupyter.neurethic.com/ direct link])
* [[Nextcloud Hub]] ([https://nextcloud.neurethic.com/ direct link])
* [[Snipe-IT]] ([https://snipe.neurethic.com/ direct link])

=== Installed on your PC/Laptop ===

* [[Element]] ([https://element.io/download direct link])
* [[Git]] ([https://git-scm.com/install/ direct link])
* An IDE (''e.g.'' [[Visual Studio Code]] ([https://code.visualstudio.com/Download direct link]))
* [[Nextcloud Hub]] ([https://nextcloud.com/install direct link])
* [[Obsidian]] ([https://obsidian.md/download direct link])
* [[PsychoPy]] ([https://www.psychopy.org/download.html direct link])
* [[Python]] ([https://www.python.org/downloads/ direct link])
* [[Zoom]] ([https://zoom.us/download direct link])

=== Installed on your smartphone ===

* [[Element]]
* [[Nextcloud Hub]]
* [[Zoom]]

[[Fichier:Qrcode_Element_Install_Phone.png|150px|gauche|vignette|Qr Code to https://element.io/download]]
[[Fichier:Qrcode_Nextcloud_Install_Phone.png|150px|droite|vignette|Qr Code to https://nextcloud.com/install]]
[[Fichier:Qrcode_Zoom_Install_Phone.png|150px|center|vignette|Qr Code to https://zoom.com/download]]

Welcome Guide

2026-03-23T15:49:36Z

Pierre.demangel : /* Bookmarked in your browser */ Add Snipe-IT

Welcome Guide

2026-03-23T15:46:48Z

Pierre.demangel : Create Page

== What you will probably need ==

=== Bookmarked in your browser ===
* [[GitLab]] ([https://gitlab.neurethic.com direct link])
* [[JupyterLab]] ([https://jupyter.neurethic.com/ direct link])
* [[Nextcloud Hub]] ([https://nextcloud.neurethic.com/ direct link])

=== Installed on your PC/Laptop ===

* [[Element]] ([https://element.io/download direct link])
* [[Git]] ([https://git-scm.com/install/ direct link])
* An IDE (''e.g.'' [[Visual Studio Code]] ([https://code.visualstudio.com/Download direct link]))
* [[Nextcloud Hub]] ([https://nextcloud.com/install direct link])
* [[Obsidian]] ([https://obsidian.md/download direct link])
* [[PsychoPy]] ([https://www.psychopy.org/download.html direct link])
* [[Python]] ([https://www.python.org/downloads/ direct link])
* [[Zoom]] ([https://zoom.us/download direct link])

=== Installed on your smartphone ===

* [[Element]]
* [[Nextcloud Hub]]
* [[Zoom]]

[[Fichier:Qrcode_Element_Install_Phone.png|150px|gauche|vignette|Qr Code to https://element.io/download]]
[[Fichier:Qrcode_Nextcloud_Install_Phone.png|150px|droite|vignette|Qr Code to https://nextcloud.com/install]]
[[Fichier:Qrcode_Zoom_Install_Phone.png|150px|center|vignette|Qr Code to https://zoom.com/download]]

Zoom

2026-03-23T15:43:25Z

Pierre.demangel : Add Qr Code to ease smartphone downloads

[[Fichier:Zoom.png|500px|droite|vignette|Zoom desktop app homepage]]

[https://zoom.us/download Download link]

[https://app.zoom.us/wc Web link]

[https://support.zoom.com/hc/en/article?id=zm_kb&sysparm_article=KB0061316 User guide]

== Overview ==

'''Zoom''' is a video conferencing platform that allows teams to communicate via live meetings, video calls, and chat. It can be used as a downloadable application or directly in a web browser, making it accessible from almost any device.

[[Fichier:Qrcode_Zoom_Install_Phone.png|150px|droite|vignette|Qr Code to https://zoom.com/download]]

== Getting Started ==

# Download Zoom or access the web version via a browser
# Create or join a meeting using the provided meeting ID or link
# Enable audio and video to participate in discussions
# Use chat, screen sharing, and recording features as needed
# Manage meetings using scheduling and breakout room tools

== Key Concepts ==

* '''Meetings:''' Real-time video or audio conferences between participants.
* '''Chat:''' Text messaging within meetings or directly to users.
* '''Web version:''' Participate in meetings through a browser without installing software.
* '''Screen sharing:''' Share your screen with others during meetings.
* '''Recording:''' Capture meetings for later review or reference.
* '''Breakout rooms:''' Separate smaller groups during larger meetings for focused discussions.

== Main Uses ==

* Conduct virtual team meetings and discussions
* Host webinars or presentations
* Collaborate remotely with colleagues or external partners
* Record meetings for documentation or training purposes
* Share screens to demonstrate software or experiment results

== Why It Matters ==

* Enables remote collaboration across locations and devices
* Facilitates real-time communication and interaction
* Supports video, audio, and text communication in one platform
* Offers tools for organization, scheduling, and recording

== When You Will Use It ==

* Attending lab meetings remotely
* Presenting project results or experiments
* Participating in online workshops or training sessions
* Collaborating with external researchers or team members

== Good Practices ==

* Test your audio and video before meetings
* Use screen sharing responsibly to avoid distractions
* Mute microphones when not speaking to reduce background noise
* Schedule meetings in advance and share links with participants

Nextcloud Hub

2026-03-23T15:42:37Z

Pierre.demangel : Add Qr Code to ease smartphone downloads

[[Fichier:Nextcloud_Files.png|520px|droite|vignette|NextcloudHub displaying files in [[Nextcloud]]]]

[https://nextcloud.com/install/#desktop-files Download link]

[https://nextcloud.neurethic.com Web Link]

[https://docs.nextcloud.com/server/latest/user_manual/en/desktop/index.html User guide]

== Overview ==

'''Nextcloud Hub''' is an integrated collaboration platform that combines cloud storage, communication, and real-time document editing.

It allows users to store and share files (via [[Nextcloud]]), send messages, make audio or video calls, manage calendars and contacts, and collaboratively edit documents.

[[Fichier:Qrcode_Nextcloud_Install_Phone.png|150px|droite|vignette|Qr Code to https://nextcloud.com/install]]

== Getting Started ==

# Install Nextcloud Hub or access it via the web
# Log in with your lab credentials
# Upload and organize project files
# Join or create team spaces for collaboration
# Start using messaging, calls, calendars, and collaborative editing tools

== Key Concepts ==

* '''Cloud storage:''' Securely store and access files across devices.
* '''Messaging and calls:''' Communicate through text, audio, or video.
* '''Calendars and contacts:''' Manage schedules and team contacts.
* '''Collaborative editing:''' Multiple users can edit documents simultaneously in real time.
* '''Web and apps:''' Access tools via browser or native desktop and mobile apps.

[[Fichier:Nextcloud_Calendar.png|460px|droite|vignette|NextcloudHub displaying an event in its calendar]]

== Main Uses ==

* Share and synchronize files among team members
* Communicate via messages, audio, and video calls
* Organize schedules and manage contacts
* Edit documents collaboratively in real time
* Access tools and files from any device

== Why It Matters ==

* Combines multiple collaboration tools in a single platform
* Supports real-time teamwork and communication
* Centralizes project-related data and activities
* Enhances productivity and reduces reliance on multiple apps

== When You Will Use It ==

* Storing and sharing project files
* Scheduling meetings and managing calendars
* Messaging or calling team members
* Collaboratively editing documents
* Accessing lab resources across devices

== Good Practices ==

* Organize files into clearly named folders
* Use appropriate sharing permissions
* Monitor notifications and calendars regularly
* Encourage collaboration within shared spaces

Element

2026-03-23T15:41:31Z

Pierre.demangel : Add Qr Code to ease smartphone downloads

[[Fichier:Element Chat.png|580px|vignette|droite|Element chat window]]

[https://element.io/download Download link]

[https://element.io/user-guide User guide]

== Overview ==

'''Element''' is an instant messaging application designed for secure team communication.

It allows users to exchange messages, make voice and video calls, and organize discussions in shared spaces.

[[Fichier:Qrcode_Element_Install_Phone.png|150px|droite|vignette|Qr Code to https://element.io/download]]

== Getting Started ==

# Download and install Element.
# Create an account or log in using your lab credentials
# Join the relevant spaces and rooms
# Set up your profile and notification preferences

== Key Concepts ==

* '''Room:''' A group conversation where multiple users can communicate together.
* '''Space:''' A collection of rooms used to organize discussions by project or topic.
* '''Direct message:''' A private conversation between two users.
* '''End-to-end encryption:''' Messages are encrypted so that only participants can read them.
* '''Matrix network:''' A decentralized communication protocol that Element is built on.

== Main Uses ==

* Share quick updates and information between team members
* Organize discussions by project, topic, or team
* Communicate through text, voice, or video calls
* Maintain persistent conversation history

== Why It Matters ==

* Ensures secure communication through encryption
* Keeps discussions organized and accessible
* Allows communication across multiple devices
* Provides independence from centralized messaging platforms

== When You Will Use It ==

* Asking quick questions to colleagues
* Participating in project-related discussions
* Joining team meetings via voice or video
* Receiving announcements and updates

== Good Practices ==

* Use the appropriate rooms for each topic
* Keep messages clear and concise
* Use threads or replies to maintain readable discussions
* Respect communication guidelines within the team

Fichier:Qr Zoom Install Phone.png

2026-03-23T15:32:57Z

Pierre.demangel : Pierre.demangel a déplacé la page Fichier:Qr Zoom Install Phone.png vers Fichier:Qrcode Zoom Install Phone.png

#REDIRECTION [[Fichier:Qrcode Zoom Install Phone.png]]

Fichier:Qrcode Zoom Install Phone.png

2026-03-23T15:32:57Z

Pierre.demangel : Pierre.demangel a déplacé la page Fichier:Qr Zoom Install Phone.png vers Fichier:Qrcode Zoom Install Phone.png

Fichier:Qrcode Nextcloud Install.png

2026-03-23T15:32:33Z

Pierre.demangel : Pierre.demangel a déplacé la page Fichier:Qrcode Nextcloud Install.png vers Fichier:Qrcode Nextcloud Install Phone.png

#REDIRECTION [[Fichier:Qrcode Nextcloud Install Phone.png]]

Fichier:Qrcode Nextcloud Install Phone.png

2026-03-23T15:32:33Z

Pierre.demangel : Pierre.demangel a déplacé la page Fichier:Qrcode Nextcloud Install.png vers Fichier:Qrcode Nextcloud Install Phone.png

Fichier:Qrcode Zoom Install Phone.png

2026-03-23T15:30:31Z

Pierre.demangel :

Fichier:Qrcode Element Install Phone.png

2026-03-23T15:30:10Z

Pierre.demangel :

Fichier:Qrcode Nextcloud Install Phone.png

2026-03-23T15:29:41Z

Pierre.demangel :

Nextcloud

2026-03-23T15:29:00Z

Pierre.demangel : Add web link

[[Fichier:Nextcloud Files.png|580px|vignette|droite|Nextcloud web-app displaying files]]

[https://nextcloud.neurethic.com Web Link]

== Overview ==

'''Nextcloud''' is a cloud storage platform that allows users to securely store, access, and synchronize files across multiple devices.

== Getting Started ==

# Install Nextcloud on your device or use the web app
# Log in with your lab credentials
# Upload files or folders to your Nextcloud account
# Set sharing permissions as needed
# Sync files across devices

== Key Concepts ==

* '''File syncing:''' Automatic updating of files across all devices.
* '''Sharing:''' Granting access to files or folders for other users or groups.
* '''Web interface:''' Accessing files through a browser without installing software.
* '''Versioning:''' Maintaining previous versions of files for safety and recovery.
* '''Permissions:''' Controlling which users can view, edit, or share files.

== Main Uses ==

* Upload and share project files with team members
* Synchronize files across desktop, mobile, and web clients
* Access files remotely from anywhere
* Maintain organized and versioned project directories

== Why It Matters ==

* Ensures team members have access to the latest files
* Reduces risk of data loss or duplication
* Facilitates collaboration across multiple devices
* Centralizes project file management

== When You Will Use It ==

* Uploading or downloading lab documents and datasets
* Sharing files with colleagues
* Accessing files while working remotely
* Collaborating on shared documents

== Good Practices ==

* Organize files into clearly named folders
* Set appropriate permissions for sharing
* Regularly back up important files
* Avoid keeping multiple conflicting file versions

Nextcloud Hub

2026-03-23T15:28:41Z

Pierre.demangel : Modify Download link to ease installation

[[Fichier:Nextcloud_Files.png|520px|droite|vignette|NextcloudHub displaying files in [[Nextcloud]]]]

[https://nextcloud.com/install/#desktop-files Download link]

[https://nextcloud.neurethic.com Web Link]

[https://docs.nextcloud.com/server/latest/user_manual/en/desktop/index.html User guide]

== Overview ==

'''Nextcloud Hub''' is an integrated collaboration platform that combines cloud storage, communication, and real-time document editing.

It allows users to store and share files (via [[Nextcloud]]), send messages, make audio or video calls, manage calendars and contacts, and collaboratively edit documents.

== Getting Started ==

# Install Nextcloud Hub or access it via the web
# Log in with your lab credentials
# Upload and organize project files
# Join or create team spaces for collaboration
# Start using messaging, calls, calendars, and collaborative editing tools

== Key Concepts ==

* '''Cloud storage:''' Securely store and access files across devices.
* '''Messaging and calls:''' Communicate through text, audio, or video.
* '''Calendars and contacts:''' Manage schedules and team contacts.
* '''Collaborative editing:''' Multiple users can edit documents simultaneously in real time.
* '''Web and apps:''' Access tools via browser or native desktop and mobile apps.

[[Fichier:Nextcloud_Calendar.png|460px|droite|vignette|NextcloudHub displaying an event in its calendar]]

== Main Uses ==

* Share and synchronize files among team members
* Communicate via messages, audio, and video calls
* Organize schedules and manage contacts
* Edit documents collaboratively in real time
* Access tools and files from any device

== Why It Matters ==

* Combines multiple collaboration tools in a single platform
* Supports real-time teamwork and communication
* Centralizes project-related data and activities
* Enhances productivity and reduces reliance on multiple apps

== When You Will Use It ==

* Storing and sharing project files
* Scheduling meetings and managing calendars
* Messaging or calling team members
* Collaboratively editing documents
* Accessing lab resources across devices

== Good Practices ==

* Organize files into clearly named folders
* Use appropriate sharing permissions
* Monitor notifications and calendars regularly
* Encourage collaboration within shared spaces

Nextcloud Hub

2026-03-23T15:13:32Z

Pierre.demangel : Add web link

[[Fichier:Nextcloud_Files.png|520px|droite|vignette|NextcloudHub displaying files in [[Nextcloud]]]]

[https://nextcloud.com/install Download link]

[https://nextcloud.neurethic.com Web Link]

[https://docs.nextcloud.com/server/latest/user_manual/en/desktop/index.html User guide]

== Overview ==

'''Nextcloud Hub''' is an integrated collaboration platform that combines cloud storage, communication, and real-time document editing.

It allows users to store and share files (via [[Nextcloud]]), send messages, make audio or video calls, manage calendars and contacts, and collaboratively edit documents.

== Getting Started ==

# Install Nextcloud Hub or access it via the web
# Log in with your lab credentials
# Upload and organize project files
# Join or create team spaces for collaboration
# Start using messaging, calls, calendars, and collaborative editing tools

== Key Concepts ==

* '''Cloud storage:''' Securely store and access files across devices.
* '''Messaging and calls:''' Communicate through text, audio, or video.
* '''Calendars and contacts:''' Manage schedules and team contacts.
* '''Collaborative editing:''' Multiple users can edit documents simultaneously in real time.
* '''Web and apps:''' Access tools via browser or native desktop and mobile apps.

[[Fichier:Nextcloud_Calendar.png|460px|droite|vignette|NextcloudHub displaying an event in its calendar]]

== Main Uses ==

* Share and synchronize files among team members
* Communicate via messages, audio, and video calls
* Organize schedules and manage contacts
* Edit documents collaboratively in real time
* Access tools and files from any device

== Why It Matters ==

* Combines multiple collaboration tools in a single platform
* Supports real-time teamwork and communication
* Centralizes project-related data and activities
* Enhances productivity and reduces reliance on multiple apps

== When You Will Use It ==

* Storing and sharing project files
* Scheduling meetings and managing calendars
* Messaging or calling team members
* Collaboratively editing documents
* Accessing lab resources across devices

== Good Practices ==

* Organize files into clearly named folders
* Use appropriate sharing permissions
* Monitor notifications and calendars regularly
* Encourage collaboration within shared spaces

Main Page

2026-03-23T14:55:18Z

Pierre.demangel : /* AAGRIP */ Rephrase redirection

<strong>MediaWiki has been installed.</strong>

Consult the [https://www.mediawiki.org/wiki/Special:MyLanguage/Help:Contents User's Guide] for information on using the wiki software.

== Getting started ==
* [https://www.mediawiki.org/wiki/Special:MyLanguage/Manual:Configuration_settings Configuration settings list]
* [https://www.mediawiki.org/wiki/Special:MyLanguage/Manual:FAQ MediaWiki FAQ]
* [https://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]
* [https://www.mediawiki.org/wiki/Special:MyLanguage/Localisation#Translation_resources Localise MediaWiki for your language]
* [https://www.mediawiki.org/wiki/Special:MyLanguage/Manual:Combating_spam Learn how to combat spam on your wiki]

== AAGRIP ==

See [[AAGRIP]] project page.

Tools

2026-03-23T14:43:06Z

Pierre.demangel : /* Lab management */ Correct spelling

== List of all the tools used by the Neurethic lab ==

=== Data Analysis ===
* [[Ash Twin]]
* [[MoniQ]]

=== Lab management ===
* [[Snipe-IT]]

=== Performance/Computation ===
* [[JupyterLab]]

=== Network/Infrastructure===
* [[Lab Streaming Layer]]
* [[Closed Network]]

=== Cloud Storage ===
* [[Nextcloud]]

=== Team Work ===
* [[Element]]
* [[Git]]
* [[GitLab]]
* [[Nextcloud Hub]]
* [[Obsidian]]
* [[Zoom]]

=== Development ===
* [[Python]]
* [[Jupyter Notebook]]
* [[Visual Studio Code]]
* [[PsychoPy]]

Snipe-IT

2026-03-23T14:42:18Z

Pierre.demangel : Correct spelling in image caption

[[Fichier:Snipe IT Assets.png|600px|droite|vignette|The Assets panel in Snipe-IT]]

[https://snipeitapp.com/download Download link]

[https://snipe.neurethic.com/ Web link]

[https://snipe-it.readme.io/docs/overview User guide]

== Overview ==

'''Snipe-IT''' is an open-source inventory management system for tracking lab assets, licenses, consumables, and other equipment. It provides both a desktop installation and a web interface for centralized management.

== Getting Started ==

# Access Snipe-IT via the web interface or install locally
# Log in with lab credentials
# Add lab assets, software licenses, consumables, and accessories
# Track usage, assignments, and license expiration
# Generate reports to review inventory status

== Key Concepts ==

* '''Assets:''' Physical equipment and devices tracked individually.
* '''Licenses:''' Software licenses and subscriptions with expiration dates.
* '''Accessories:''' Lab peripherals and auxiliary tools.
* '''Consumables:''' Items that are used up over time, such as chemicals or office supplies.
* '''EULA tracking:''' Management of software end-user license agreements.
* '''Web interface:''' Centralized access to inventory information from any device.

== Main Uses ==

* Track lab equipment and hardware
* Monitor software licenses and renewals
* Manage consumables and accessories
* Keep records of EULAs for compliance
* Generate reports for audits and inventory review

== Why It Matters ==

* Provides a centralized, accurate inventory of all lab assets
* Helps ensure compliance with licensing agreements
* Reduces loss and misplacement of lab equipment
* Facilitates planning and budgeting for replacements or upgrades

== When You Will Use It ==

* Checking the availability of lab assets or consumables
* Recording new equipment or software purchases
* Monitoring license expiration dates
* Preparing inventory reports or audits
* Assigning equipment to team members or projects

== Good Practices ==

* Keep inventory records up to date
* Assign assets to users to maintain accountability
* Regularly audit inventory to prevent discrepancies
* Document license terms and expiration dates clearly

== Tutorials ==

* [https://www.youtube.com/watch?v=TDyyjl_MBps Snipe-IT Open Source Asset Management// Training and Full Review Step by Step 2022 Edition]

Snipe IT

2026-03-23T14:41:23Z

Pierre.demangel : Pierre.demangel a déplacé la page Snipe IT vers Snipe-IT

#REDIRECTION [[Snipe-IT]]

Snipe-IT

2026-03-23T14:41:23Z

Pierre.demangel : Pierre.demangel a déplacé la page Snipe IT vers Snipe-IT

[[Fichier:Snipe IT Assets.png|600px|droite|vignette|The Assets panel in Snipe-It]]

[https://snipeitapp.com/download Download link]

[https://snipe.neurethic.com/ Web link]

[https://snipe-it.readme.io/docs/overview User guide]

== Overview ==

'''Snipe-IT''' is an open-source inventory management system for tracking lab assets, licenses, consumables, and other equipment. It provides both a desktop installation and a web interface for centralized management.

== Getting Started ==

# Access Snipe-IT via the web interface or install locally
# Log in with lab credentials
# Add lab assets, software licenses, consumables, and accessories
# Track usage, assignments, and license expiration
# Generate reports to review inventory status

== Key Concepts ==

* '''Assets:''' Physical equipment and devices tracked individually.
* '''Licenses:''' Software licenses and subscriptions with expiration dates.
* '''Accessories:''' Lab peripherals and auxiliary tools.
* '''Consumables:''' Items that are used up over time, such as chemicals or office supplies.
* '''EULA tracking:''' Management of software end-user license agreements.
* '''Web interface:''' Centralized access to inventory information from any device.

== Main Uses ==

* Track lab equipment and hardware
* Monitor software licenses and renewals
* Manage consumables and accessories
* Keep records of EULAs for compliance
* Generate reports for audits and inventory review

== Why It Matters ==

* Provides a centralized, accurate inventory of all lab assets
* Helps ensure compliance with licensing agreements
* Reduces loss and misplacement of lab equipment
* Facilitates planning and budgeting for replacements or upgrades

== When You Will Use It ==

* Checking the availability of lab assets or consumables
* Recording new equipment or software purchases
* Monitoring license expiration dates
* Preparing inventory reports or audits
* Assigning equipment to team members or projects

== Good Practices ==

* Keep inventory records up to date
* Assign assets to users to maintain accountability
* Regularly audit inventory to prevent discrepancies
* Document license terms and expiration dates clearly

== Tutorials ==

* [https://www.youtube.com/watch?v=TDyyjl_MBps Snipe-IT Open Source Asset Management// Training and Full Review Step by Step 2022 Edition]

AAGRIP

2026-03-23T13:55:42Z

Pierre.demangel : Correct gallicisms

== AAGRIP ==
[[File:Yoda Grip Force.png|thumb|May the gripforce be with you]]

'''Evaluate Attributed Agency through GRIP Force.'''

Sense of Agency is the sense of control of our own actions.

Attributed Agency is the sense of control of actions performed by another person.

Grip Force is the evaluated pressure in Newton applied on a small sensor held in hands.

=== Music ===

In order to study attributed agency in digital interactions, we use electronic music materials.
Electronic music gives us the possibility to easily modify the relationship between the action and its consequences.

=== Robot ===

We also study attributed agency in digital interactions with robots.
For that, we use some videos of a robot speaking.

[[Baseline]]

== Materials or Hardware ==

=== Acquisition Cards ===
NI acquisition cards -> drivers only available on Windows and not on Linux

=== Screen ===
Check the refresh rate of the screen used. The refresh rate may be less than advertised if a display port cable is not used.

Operating systems usually have a software permanently running to handle the display of the screen. This software can disturb experiment framework to ensure the vertical synchronization of the screen. On Windows, this software, the Desktop Windows Manager (DWM), prevents the Psychtoolbox to guarantee the constant vertical frame rate of the screen.

=== F/T Sensors ===

Power supply of the computer affects the quality of the signal collected with f/t sensors.

=== Arduino ===

=== Troubleshooting ===

== Software ==

=== Experiment frameworks ===
Framework available to build experiment : [[PsychoPy]], Psychtoolbox, OpenSesame

[[PsychoPy]] and OpenSesame rely on Python, unlike Psychtoolbox which relies on Matlab.

We chose [[PsychoPy]] for our project because the package already offers some interesting functionalities such as stimuli pre-loading, interval between frames recording, time blocked until the screen is fully displayed... Besides, as it relies on Python, it's easier to custom our script to add hardware and/or [[Lab Streaming Layer|LSL]] trigger.

Stimuli pre-loading is handled with the static component in the builder interface of [[PsychoPy]] and it allows us to avoid the delay between the start of the trial and the launch of the stimulus which will depend on the kind and the size of the stimulus.

[[PsychoPy]] experiment can be launched by command line if you execute the python file in the [[PsychoPy]] installation folder. Create a python virtual environment with the [[PsychoPy]] package doesn't seems to work to launch experiment in it.

[[PsychoPy]] has 4 different back-ends to handle video files : ffpyplayer, moviepy, opencv, vlc

*ffpyplayer : bug if there is no sound file or if it's corrupted

*moviepy : a lot of errors

*opencv : works even without audio file but if we use the static component to preload the video, the audio part launches briefly at the preload time.

*vlc : error during the initialization, it may need additional packages

([[PsychoPy]] seems to keep a lot of things in RAM when you run an experiment multiple times so it may be better to restart it regularly)

You can create your experiment from the builder and generate the [[Python]] file associated after this. If you want to edit this file to add code not supported by the builder, keep in mind that every time you refresh the python file from the builder, it will erase the modifications made in the file.

Loop element in the builder is transcribed in TrialHandler object in code (you won't find any doc on loop element but you can seek for TrialHandler to know more about options and properties).

It's possible to retrieve the frame index of a playing movie component. It may not be useful to detect frame drop because it will always give an answer so it may be a parallel process which looks at the frame index at a specific interval.

=== LSL ===

[[Lab Streaming Layer|The lab streaming layer (LSL)]] is a system for the unified collection of measurement time series in research experiments that handles both the networking, time-synchronization, (near-) real-time access as well as optionally the centralized collection, viewing and disk recording of the data.

The core library liblsl is supported on many languages : C, C++, [[Python]], Matlab, C#, Java. We used [[Python]] interface with [https://github.com/chkothe/pylsl/tree/master pylsl] library.

You can find explanations and examples on their Github for this library.

==== Discoveries ====
If you use the resolve_stream() function to find your stream, the script will wait until it finds a stream corresponding to your research. It's better to use resolve_byprop() which gives us more flexibility and we can specify the amount of time the script should wait until finding a stream or the number of streams we are looking for. You also have the possibility to fetch all the streams available in an array with resolve_stream'''s'''()

Documentation recommends to seek streams by type but you can also look by name or source_id which can be more useful when you are working with multiple streams.

You can do multiple streams in the same script from a single computer but you can't stream and retrieve data in the same script, you will get an error of multi-casting.

By default, when you create the object to retrieve data from a stream (StreamInlet), this is made with some interesting arguments. One of these is ''recover'' which is True by default and this means it will try to reconnect to the stream when connection broke off. This is useful to prevent lost data with connection problems but the script will freeze until it reconnects to the stream. If you cut intentionally a stream of data while a script was still listening, the listener will freeze. You can prevent this by putting False to the recover parameter at the creation of the StreamInlet or by using the close_stream() function on the listener before the connection to the stream broke off (''documentation says that this function will drop the data in transmission or in the buffer'').

Fichier:Neurethic Blue & Yellow Logo.png

2026-03-23T13:45:28Z

Pierre.demangel :

Fichier:Neurethic Green Logo.png

2026-03-23T13:44:39Z

Pierre.demangel :

Nextcloud Hub

2026-03-23T13:12:37Z

Pierre.demangel : Add Screenshots

[[Fichier:Nextcloud_Files.png|520px|droite|vignette|NextcloudHub displaying files in [[Nextcloud]]]]

[https://nextcloud.com/install Download link]

[https://docs.nextcloud.com/server/latest/user_manual/en/desktop/index.html User guide]

== Overview ==

'''Nextcloud Hub''' is an integrated collaboration platform that combines cloud storage, communication, and real-time document editing.

It allows users to store and share files (via [[Nextcloud]]), send messages, make audio or video calls, manage calendars and contacts, and collaboratively edit documents.

== Getting Started ==

# Install Nextcloud Hub or access it via the web
# Log in with your lab credentials
# Upload and organize project files
# Join or create team spaces for collaboration
# Start using messaging, calls, calendars, and collaborative editing tools

== Key Concepts ==

* '''Cloud storage:''' Securely store and access files across devices.
* '''Messaging and calls:''' Communicate through text, audio, or video.
* '''Calendars and contacts:''' Manage schedules and team contacts.
* '''Collaborative editing:''' Multiple users can edit documents simultaneously in real time.
* '''Web and apps:''' Access tools via browser or native desktop and mobile apps.

[[Fichier:Nextcloud_Calendar.png|460px|droite|vignette|NextcloudHub displaying an event in its calendar]]

== Main Uses ==

* Share and synchronize files among team members
* Communicate via messages, audio, and video calls
* Organize schedules and manage contacts
* Edit documents collaboratively in real time
* Access tools and files from any device

== Why It Matters ==

* Combines multiple collaboration tools in a single platform
* Supports real-time teamwork and communication
* Centralizes project-related data and activities
* Enhances productivity and reduces reliance on multiple apps

== When You Will Use It ==

* Storing and sharing project files
* Scheduling meetings and managing calendars
* Messaging or calling team members
* Collaboratively editing documents
* Accessing lab resources across devices

== Good Practices ==

* Organize files into clearly named folders
* Use appropriate sharing permissions
* Monitor notifications and calendars regularly
* Encourage collaboration within shared spaces

PsychoPy

2026-03-23T13:09:33Z

Pierre.demangel : Add Screenshots

[[Fichier:PsychoPy_Builder.png|520px|droite|vignette|PsychoPy Builder view]]

[https://www.psychopy.org/download.html Download link]

[https://www.psychopy.org/documentation.html User guide]

== Overview ==

'''PsychoPy''' is an open-source software tool to create and run behavioral and cognitive experiments. It supports both a desktop application and online experiments via '''Pavlovia''', enabling participants to take part remotely in web browsers without requiring local installation.

PsychoPy provides a '''Builder view''' for drag-and-drop experiment design, suitable for users without coding experience, and a '''Coder view''' for advanced customization with [[Python]]. Its precise timing and synchronization features make it a standard tool for psychology and neuroscience research.

== Getting Started ==

# Install PsychoPy
# Choose Builder or Coder view depending on your experience and needs
# Create a new experiment and define routines and stimuli
# Run the experiment locally or upload it to Pavlovia for online participation
# Download and analyze collected data

== Key Concepts ==

[[Fichier:PsychoPy_Runner.png|420px|droite|vignette|PsychoPy Runner view]]

* '''Builder view:''' Visual interface for constructing experiments using components like stimuli, responses, and routines.
* '''Coder view:''' [[Python]]-based interface for scripting and customizing experiments.
* '''Stimuli:''' Text, images, sounds, or videos presented to participants.
* '''Responses:''' Inputs recorded from participants, such as key presses or mouse clicks.
* '''Timing precision:''' Automatic synchronization with the display refresh rate to ensure accurate stimulus presentation.
* '''Pavlovia:''' Online platform to host, run, and collect data from experiments in a web browser.
* '''Experiment routines:''' Sequences of events, such as stimuli presentation and response recording.

== Main Uses ==

* Create and run behavioral, cognitive, and perceptual experiments
* Present stimuli with high temporal precision
* Record participant responses accurately
* Deploy experiments online via Pavlovia for remote participation
* Test and prototype experiments quickly in Builder view before customizing in Coder view

== Why It Matters ==

* Enables rapid creation of experiments with minimal coding
* Supports both local and online participant testing
* Provides precise control over stimulus presentation timing
* Facilitates reproducibility and sharing of experimental workflows

[[Fichier:PsychoPy_Coder.png|420px|droite|vignette|PsychoPy Coder view]]

== When You Will Use It ==

* Designing and testing new behavioral experiments
* Running experiments in the lab or remotely via web browsers
* Collecting and analyzing participant data
* Customizing experiments with [[Python]] for advanced features

== Good Practices ==

* Test experiments for timing accuracy before running actual sessions
* Keep routines and code well-organized for reproducibility
* Use descriptive file names and structured folders for experiments
* Backup all experiment files and collected data

== Tutorials ==

* [https://youtube.com/playlist?list=PL6PJquR5BWXllUt585cRJWcRTly55iXTm PsychoPy Help Tutorial Series [NEW]]

Visual Studio Code

2026-03-23T13:06:00Z

Pierre.demangel : Add Screenshots

[[Fichier: Visual_Studio_Code_Code.png|520px|droite|vignette|A [[Python]] script opened in Visual Studio Code]]

[https://code.visualstudio.com/Download Download link]

[https://vscode.dev/ Web link]

[https://code.visualstudio.com/docs User guide]

== Overview ==

'''Visual Studio Code (VS Code)''' is a lightweight, versatile Integrated Development Environment (IDE) that can be used as a desktop application or directly in a web browser.

It supports a wide range of programming languages through extensions and provides features such as debugging, code navigation, version control integration, and syntax highlighting.

== Getting Started ==

# Download VS Code or access it through a web browser
# Install extensions for the programming languages you plan to use
# Open or create a new project folder
# Alternatively, [[Git]] repositories can be cloned
# Write and test code using the editor and debugger
# Use version control to track changes and collaborate with team members

== Key Concepts ==

[[Fichier: Visual_Studio_Code_Marketplace.png|400px|droite|vignette|The Visual Studio Code Marketplace]]

* '''Extensions:''' Add-ons that provide language support, debugging tools, or custom features.
* '''Marketplace:''' Online repository where VS Code extensions are freely available.
* '''Code editor:''' Central interface to write, edit, and navigate source code.
* '''Debugger:''' Tool for testing and identifying issues in code.
* '''Version control integration:''' Built-in support for [[Git]] and other versioning systems.
* '''Web version:''' Run VS Code directly in a browser without installation.

== Main Uses ==

* Develop using [[Python]], JavaScript, or other programming languages
* Edit and debug code with advanced features
* Integrated version control for collaborative development
* Extend functionality using extensions for specific languages or workflows
* Access coding environment from any device using the web version

== Why It Matters ==

* Provides a flexible IDE suitable for multiple programming languages
* Supports both desktop and browser-based development
* Enhances productivity with extensions and integrated tools
* Facilitates collaboration through version control integration

== When You Will Use It ==

* Writing or editing scripts for experiments and data analysis
* Debugging and testing code
* Managing code projects in [[Git]] repositories
* Using custom extensions for specific scientific workflows

== Good Practices ==

* Organize code in clearly structured folders
* Install only necessary extensions to avoid clutter
* Use version control consistently to track changes
* Customize editor settings to match workflow preferences

== Tutorials ==

* [https://www.youtube.com/watch?v=ORrELERGIHs VSCode Tutorial For Beginners - Getting Started With VSCode]

Fichier:Visual Code Studio Marketplace.png

2026-03-23T13:00:44Z

Pierre.demangel : Pierre.demangel a déplacé la page Fichier:Visual Code Studio Marketplace.png vers Fichier:Visual Studio Code Marketplace.png

#REDIRECTION [[Fichier:Visual Studio Code Marketplace.png]]

Fichier:Visual Studio Code Marketplace.png

2026-03-23T13:00:44Z

Pierre.demangel : Pierre.demangel a déplacé la page Fichier:Visual Code Studio Marketplace.png vers Fichier:Visual Studio Code Marketplace.png

Fichier:Visual Code Studio Code.png

2026-03-23T13:00:09Z

Pierre.demangel : Pierre.demangel a déplacé la page Fichier:Visual Code Studio Code.png vers Fichier:Visual Studio Code Code.png

#REDIRECTION [[Fichier:Visual Studio Code Code.png]]

Fichier:Visual Studio Code Code.png

2026-03-23T13:00:09Z

Pierre.demangel : Pierre.demangel a déplacé la page Fichier:Visual Code Studio Code.png vers Fichier:Visual Studio Code Code.png

JupyterLab

2026-03-23T12:56:42Z

Pierre.demangel : /* Key Concepts */ Add link inside image caption

[[Fichier:JupyterLab_Accueil.png|580px|droite|vignette|JupyterLab Homepage]]

[https://jupyter.org/install Download link]

[https://jupyter.neurethic.com/ Web link]

[https://jupyterlab.readthedocs.io/en/latest/ User guide]

== Overview ==

'''JupyterLab''' is an interactive development environment used to create, run, and manage computational work, mainly in [[Python]].

It provides access to notebooks, terminals, and files through a web interface.

== Getting Started ==

# Access the JupyterLab web interface or install it locally
# Log in to the [https://jupyter.neurethic.com/ neurethic server] if required
# Navigate the file system using the interface
# Open or create notebooks and other files
# Select the appropriate kernel and start working

== Key Concepts ==

* '''Workspace:''' The interface where you organize notebooks, files, and tools.
* '''Notebook integration:''' JupyterLab allows you to create and edit notebook files (.ipynb).
* '''Kernel:''' The engine that executes code (e.g., [[Python]]).
* '''Remote server:''' A machine that runs computations remotely.
* '''File browser:''' Interface to manage project files and directories.

[[Fichier: JupyterLab_Notebook.png|500px|droite|vignette|A [[Jupyter Notebook]] inside JupyterLab]]

== Main Uses ==

* Access and use remote computing resources
* Create and manage [[Jupyter Notebook|Jupyter Notebooks]]
* Run [[Python]] scripts and analyses
* Organize project files and workflows

== Why It Matters ==

* Provides a unified environment for development and computation
* Enables the use of powerful remote machines
* Centralizes files, notebooks, and tools in one interface
* Supports reproducible and organized workflows

== When You Will Use It ==

* Accessing the lab’s computational resources
* Creating or editing notebooks
* Running data analysis or heavy computations
* Managing project files remotely

== Good Practices ==

* Keep files and folders well organized
* Use clear naming conventions for notebooks and scripts
* Shut down unused kernels to free resources
* Regularly save your work

== Tutorials ==

* [https://www.youtube.com/watch?v=5pf0_bpNbkw Jupyter Notebook Complete Beginner Guide - From Jupyter to JupyterLab, Google Colab and Kaggle!]

Jupyter Notebook

2026-03-23T12:56:07Z

Pierre.demangel : Add Screenshots

[[Fichier:Jupyter_Notebook.png|580px|droite|vignette|A Jupyter Notebook showing a code cell and its output]]

[https://jupyter-notebook.readthedocs.io/en/latest/ User Guide]

== Overview ==

'''Jupyter Notebooks''' are interactive files used within environments like [[JupyterLab]] to write, execute, and document code.

They allow users to combine [[Python]] code, text explanations, and outputs (such as figures or tables) in a single document.

== Getting Started ==

# Open [[JupyterLab]] or a compatible environment
# Create a new notebook (.ipynb file)
# Add code and [https://www.markdownguide.org/basic-syntax/ Markdown] cells
# Execute cells step by step
# Save and share the notebook

== Key Concepts ==

* '''Notebook (.ipynb):''' A file containing code, text, and outputs.
* '''Cell:''' A unit of content within a notebook.
* '''Code cell:''' Executes [[Python]] code through the kernel.
* '''Markdown cell:''' Contains formatted text for explanations.
* '''Execution order:''' Cells are run one at a time and may depend on previous results.

== Main Uses ==

* Write and test [[Python]] code interactively
* Document experiments with explanations and results
* Visualize data directly within the notebook
* Share analysis in a reproducible format

[[Fichier:JupyterLab_Notebook.png|450px|droite|vignette|A Jupyter Notebook inside [[JupyterLab]]]]

== Why It Matters ==

* Combines code and documentation in a single file
* Makes results easier to understand and reproduce
* Supports iterative and exploratory workflows
* Facilitates collaboration and knowledge sharing

== When You Will Use It ==

* Performing data analysis
* Prototyping algorithms or workflows
* Writing experiment reports with code and results
* Sharing work with other team members

== Good Practices ==

* Structure notebooks with clear sections and titles
* Use Markdown cells to explain your reasoning
* Run cells in order to ensure consistency
* Keep notebooks clean and readable

== Tutorials ==

* [https://www.youtube.com/watch?v=5pf0_bpNbkw Jupyter Notebook Complete Beginner Guide - From Jupyter to JupyterLab, Google Colab and Kaggle!]

Zoom

2026-03-23T12:53:03Z

Pierre.demangel : Add Screenshot

[[Fichier:Zoom.png|500px|droite|vignette|Zoom desktop app homepage]]

[https://zoom.us/download Download link]

[https://app.zoom.us/wc Web link]

[https://support.zoom.com/hc/en/article?id=zm_kb&sysparm_article=KB0061316 User guide]

== Overview ==

'''Zoom''' is a video conferencing platform that allows teams to communicate via live meetings, video calls, and chat. It can be used as a downloadable application or directly in a web browser, making it accessible from almost any device.

== Getting Started ==

# Download Zoom or access the web version via a browser
# Create or join a meeting using the provided meeting ID or link
# Enable audio and video to participate in discussions
# Use chat, screen sharing, and recording features as needed
# Manage meetings using scheduling and breakout room tools

== Key Concepts ==

* '''Meetings:''' Real-time video or audio conferences between participants.
* '''Chat:''' Text messaging within meetings or directly to users.
* '''Web version:''' Participate in meetings through a browser without installing software.
* '''Screen sharing:''' Share your screen with others during meetings.
* '''Recording:''' Capture meetings for later review or reference.
* '''Breakout rooms:''' Separate smaller groups during larger meetings for focused discussions.

== Main Uses ==

* Conduct virtual team meetings and discussions
* Host webinars or presentations
* Collaborate remotely with colleagues or external partners
* Record meetings for documentation or training purposes
* Share screens to demonstrate software or experiment results

== Why It Matters ==

* Enables remote collaboration across locations and devices
* Facilitates real-time communication and interaction
* Supports video, audio, and text communication in one platform
* Offers tools for organization, scheduling, and recording

== When You Will Use It ==

* Attending lab meetings remotely
* Presenting project results or experiments
* Participating in online workshops or training sessions
* Collaborating with external researchers or team members

== Good Practices ==

* Test your audio and video before meetings
* Use screen sharing responsibly to avoid distractions
* Mute microphones when not speaking to reduce background noise
* Schedule meetings in advance and share links with participants

GitLab

2026-03-23T12:50:51Z

Pierre.demangel : Enlarge Screenshot

[[Fichier:GitLab_Projects.png|520px|droite|vignette|GitLab web-app displaying projects]]

[https://gitlab.neurethic.com/ Web link]

[https://docs.gitlab.com/ User guide]

== Overview ==

'''GitLab''' is a web-based platform used to manage and collaborate on projects with '''[[Git]]''', a version control system.

It enables team members to store code, track changes, and work simultaneously on the same project safely.

== Getting Started ==

# Create or access your account on the lab GitLab instance
# Join or be added to a project repository
# Install [[Git]] on your computer
# Clone a repository to your local machine
# Make changes, commit them, and push them back to GitLab

== Key Concepts ==

* '''Repository (repo):''' A project space containing files and their complete history of changes.
* '''Commit:''' A saved change to the project, with a message describing the modification.
* '''Branch:''' A parallel version of the project used to develop features or test changes safely.
* '''Merge:''' The process of integrating changes from one branch into another.
* '''Continuous Integration/Continuous Distribution (CI/CD):''' Automated testing, building, or deployment when changes are made.

== Main Uses ==

* Store and share project code and data
* Collaborate on experiments and software development
* Track tasks and issues related to projects
* Automatically run tests and workflows (CI/CD)
* Maintain a complete history of all project changes

== Why It Matters ==

* Prevents loss of work by keeping a full change history
* Enables multiple people to work on the same project safely
* Improves organization through issues and project tracking
* Automates repetitive tasks like testing and deployment

== When You Will Use It ==

* Uploading your work to a shared project
* Downloading (cloning) existing repositories
* Contributing to team projects
* Tracking or updating tasks and issues
* Reviewing changes from other team members

== Good Practices ==

* Write clear and descriptive commit messages, using [https://www.conventionalcommits.org/en/v1.0.0/ conventional commits]
* Use branches for new features or experiments
* Pull changes regularly to stay up to date
* Keep repositories organized and well documented

Element

2026-03-23T12:49:37Z

Pierre.demangel : Enlarge Screenshot

[[Fichier:Element Chat.png|580px|vignette|droite|Element chat window.]]

[https://element.io/download Download link]

[https://element.io/user-guide User guide]

== Overview ==

'''Element''' is an instant messaging application designed for secure team communication.

It allows users to exchange messages, make voice and video calls, and organize discussions in shared spaces.

== Getting Started ==

# Download and install Element.
# Create an account or log in using your lab credentials
# Join the relevant spaces and rooms
# Set up your profile and notification preferences

== Key Concepts ==

* '''Room:''' A group conversation where multiple users can communicate together.
* '''Space:''' A collection of rooms used to organize discussions by project or topic.
* '''Direct message:''' A private conversation between two users.
* '''End-to-end encryption:''' Messages are encrypted so that only participants can read them.
* '''Matrix network:''' A decentralized communication protocol that Element is built on.

== Main Uses ==

* Share quick updates and information between team members
* Organize discussions by project, topic, or team
* Communicate through text, voice, or video calls
* Maintain persistent conversation history

== Why It Matters ==

* Ensures secure communication through encryption
* Keeps discussions organized and accessible
* Allows communication across multiple devices
* Provides independence from centralized messaging platforms

== When You Will Use It ==

* Asking quick questions to colleagues
* Participating in project-related discussions
* Joining team meetings via voice or video
* Receiving announcements and updates

== Good Practices ==

* Use the appropriate rooms for each topic
* Keep messages clear and concise
* Use threads or replies to maintain readable discussions
* Respect communication guidelines within the team

Nextcloud

2026-03-23T12:48:51Z

Pierre.demangel : Enlarge Screenshot

[[Fichier:Nextcloud Files.png|580px|vignette|droite|Nextcloud web-app displaying files]]

== Overview ==

'''Nextcloud''' is a cloud storage platform that allows users to securely store, access, and synchronize files across multiple devices.

== Getting Started ==

# Install Nextcloud on your device or use the web app
# Log in with your lab credentials
# Upload files or folders to your Nextcloud account
# Set sharing permissions as needed
# Sync files across devices

== Key Concepts ==

* '''File syncing:''' Automatic updating of files across all devices.
* '''Sharing:''' Granting access to files or folders for other users or groups.
* '''Web interface:''' Accessing files through a browser without installing software.
* '''Versioning:''' Maintaining previous versions of files for safety and recovery.
* '''Permissions:''' Controlling which users can view, edit, or share files.

== Main Uses ==

* Upload and share project files with team members
* Synchronize files across desktop, mobile, and web clients
* Access files remotely from anywhere
* Maintain organized and versioned project directories

== Why It Matters ==

* Ensures team members have access to the latest files
* Reduces risk of data loss or duplication
* Facilitates collaboration across multiple devices
* Centralizes project file management

== When You Will Use It ==

* Uploading or downloading lab documents and datasets
* Sharing files with colleagues
* Accessing files while working remotely
* Collaborating on shared documents

== Good Practices ==

* Organize files into clearly named folders
* Set appropriate permissions for sharing
* Regularly back up important files
* Avoid keeping multiple conflicting file versions

JupyterLab

2026-03-23T12:48:18Z

Pierre.demangel : Enlarge Screenshots

[[Fichier:JupyterLab_Accueil.png|580px|droite|vignette|JupyterLab Homepage]]

[https://jupyter.org/install Download link]

[https://jupyter.neurethic.com/ Web link]

[https://jupyterlab.readthedocs.io/en/latest/ User guide]

== Overview ==

'''JupyterLab''' is an interactive development environment used to create, run, and manage computational work, mainly in [[Python]].

It provides access to notebooks, terminals, and files through a web interface.

== Getting Started ==

# Access the JupyterLab web interface or install it locally
# Log in to the [https://jupyter.neurethic.com/ neurethic server] if required
# Navigate the file system using the interface
# Open or create notebooks and other files
# Select the appropriate kernel and start working

== Key Concepts ==

* '''Workspace:''' The interface where you organize notebooks, files, and tools.
* '''Notebook integration:''' JupyterLab allows you to create and edit notebook files (.ipynb).
* '''Kernel:''' The engine that executes code (e.g., [[Python]]).
* '''Remote server:''' A machine that runs computations remotely.
* '''File browser:''' Interface to manage project files and directories.

[[Fichier: JupyterLab_Notebook.png|500px|droite|vignette|A Jupyter Notebook inside JupyterLab]]

== Main Uses ==

* Access and use remote computing resources
* Create and manage [[Jupyter Notebook|Jupyter Notebooks]]
* Run [[Python]] scripts and analyses
* Organize project files and workflows

== Why It Matters ==

* Provides a unified environment for development and computation
* Enables the use of powerful remote machines
* Centralizes files, notebooks, and tools in one interface
* Supports reproducible and organized workflows

== When You Will Use It ==

* Accessing the lab’s computational resources
* Creating or editing notebooks
* Running data analysis or heavy computations
* Managing project files remotely

== Good Practices ==

* Keep files and folders well organized
* Use clear naming conventions for notebooks and scripts
* Shut down unused kernels to free resources
* Regularly save your work

== Tutorials ==

* [https://www.youtube.com/watch?v=5pf0_bpNbkw Jupyter Notebook Complete Beginner Guide - From Jupyter to JupyterLab, Google Colab and Kaggle!]

Snipe-IT

2026-03-23T12:46:46Z

Pierre.demangel : Enlarge Screenshot

Obsidian

2026-03-23T12:43:14Z

Pierre.demangel : Add Screenshot

[[Fichier:Obsidian.png|droite|450px|vignette|This page written in Obsidian]]

[https://obsidian.md/download Download link]

[https://help.obsidian.md/ User guide]

== Overview ==

'''Obsidian''' is a text editor for creating and managing notes in the [https://www.markdownguide.org/basic-syntax/ Markdown format (.md)].

Notes are stored in folders called "Vaults" and can be interconnected through internal links. Obsidian also supports a wide range of community-developed plugins to extend its functionality.

== Getting Started ==

# Download and install Obsidian on your device or use the web version
# Create a new Vault for your project or lab notes
#* It is possible to create a vault in a locally synced cloud to make it accessible from anywhere (''e.g.'' [[Nextcloud]] )
# Add Markdown files for notes, procedures, or references
# Link related notes using internal links and tags
# Explore plugins to extend functionality as needed

== Key Concepts ==

* '''Vault:''' A folder containing Markdown files that make up a collection of notes.
* '''Markdown:''' A lightweight markup language used for formatting text.
* '''Internal links:''' Connections between notes to create a network of related information.
* '''Tags:''' Labels used to organize and categorize notes.
* '''Plugins:''' Add-ons that extend Obsidian’s functionality.

== Main Uses ==

* Organize project documentation and research notes
* Link related notes for easy navigation and reference
* Visualize relationships between files using graph view
* Customize features with community plugins
* Maintain structured and searchable knowledge bases

[[Fichier: Obsidian_Graph.png|350px|droite|vignette|Obsidian graph view of the [[Tools]] page's links]]

== Why It Matters ==

* Centralizes documentation and notes in one system
* Supports knowledge discovery through linking and visualization
* Enhances productivity with organization and search tools
* Extensible through community plugins for added functionality

== When You Will Use It ==

* Taking and organizing project notes
* Documenting experiments or procedures
* Visualizing connections between topics or data
* Using plugins for task management, templates, or advanced workflows

== Good Practices ==

* Organize notes with clear file names and folder structures
* Use consistent tags for categorization
* Regularly update notes to keep documentation current
* Make use of graph view to identify relationships between notes

== Tutorials ==

* [https://www.youtube.com/watch?v=gafuqdKwD_U The Ultimate Obsidian for Beginner's Guide 2025]

Fichier:Obsidian Graph.png

2026-03-23T12:42:23Z

Pierre.demangel : Pierre.demangel a téléversé une nouvelle version de Fichier:Obsidian Graph.png

GitLab

2026-03-23T12:32:11Z

Pierre.demangel : Add Screenshot

[https://gitlab.neurethic.com/ Web link]

[https://docs.gitlab.com/ User guide]

[[Fichier:GitLab_Projects.png|vignette|GitLab web-app displaying projects]]

== Overview ==

'''GitLab''' is a web-based platform used to manage and collaborate on projects with '''[[Git]]''', a version control system.

It enables team members to store code, track changes, and work simultaneously on the same project safely.

== Getting Started ==

# Create or access your account on the lab GitLab instance
# Join or be added to a project repository
# Install [[Git]] on your computer
# Clone a repository to your local machine
# Make changes, commit them, and push them back to GitLab

== Key Concepts ==

* '''Repository (repo):''' A project space containing files and their complete history of changes.
* '''Commit:''' A saved change to the project, with a message describing the modification.
* '''Branch:''' A parallel version of the project used to develop features or test changes safely.
* '''Merge:''' The process of integrating changes from one branch into another.
* '''Continuous Integration/Continuous Distribution (CI/CD):''' Automated testing, building, or deployment when changes are made.

== Main Uses ==

* Store and share project code and data
* Collaborate on experiments and software development
* Track tasks and issues related to projects
* Automatically run tests and workflows (CI/CD)
* Maintain a complete history of all project changes

== Why It Matters ==

* Prevents loss of work by keeping a full change history
* Enables multiple people to work on the same project safely
* Improves organization through issues and project tracking
* Automates repetitive tasks like testing and deployment

== When You Will Use It ==

* Uploading your work to a shared project
* Downloading (cloning) existing repositories
* Contributing to team projects
* Tracking or updating tasks and issues
* Reviewing changes from other team members

== Good Practices ==

* Write clear and descriptive commit messages, using [https://www.conventionalcommits.org/en/v1.0.0/ conventional commits]
* Use branches for new features or experiments
* Pull changes regularly to stay up to date
* Keep repositories organized and well documented

Element

2026-03-23T12:30:04Z

Pierre.demangel : Add Screenshot

[https://element.io/download Download link]

[https://element.io/user-guide User guide]

[[Fichier:Element Chat.png|vignette|droite|Element chat window.]]

== Overview ==

'''Element''' is an instant messaging application designed for secure team communication.

It allows users to exchange messages, make voice and video calls, and organize discussions in shared spaces.

== Getting Started ==

# Download and install Element.
# Create an account or log in using your lab credentials
# Join the relevant spaces and rooms
# Set up your profile and notification preferences

== Key Concepts ==

* '''Room:''' A group conversation where multiple users can communicate together.
* '''Space:''' A collection of rooms used to organize discussions by project or topic.
* '''Direct message:''' A private conversation between two users.
* '''End-to-end encryption:''' Messages are encrypted so that only participants can read them.
* '''Matrix network:''' A decentralized communication protocol that Element is built on.

== Main Uses ==

* Share quick updates and information between team members
* Organize discussions by project, topic, or team
* Communicate through text, voice, or video calls
* Maintain persistent conversation history

== Why It Matters ==

* Ensures secure communication through encryption
* Keeps discussions organized and accessible
* Allows communication across multiple devices
* Provides independence from centralized messaging platforms

== When You Will Use It ==

* Asking quick questions to colleagues
* Participating in project-related discussions
* Joining team meetings via voice or video
* Receiving announcements and updates

== Good Practices ==

* Use the appropriate rooms for each topic
* Keep messages clear and concise
* Use threads or replies to maintain readable discussions
* Respect communication guidelines within the team

Nextcloud

2026-03-23T12:28:30Z

Pierre.demangel : Add Screenshot

[[Fichier:Nextcloud Files.png|vignette|droite|Nextcloud web-app displaying files]]

== Overview ==

'''Nextcloud''' is a cloud storage platform that allows users to securely store, access, and synchronize files across multiple devices.

== Getting Started ==

# Install Nextcloud on your device or use the web app
# Log in with your lab credentials
# Upload files or folders to your Nextcloud account
# Set sharing permissions as needed
# Sync files across devices

== Key Concepts ==

* '''File syncing:''' Automatic updating of files across all devices.
* '''Sharing:''' Granting access to files or folders for other users or groups.
* '''Web interface:''' Accessing files through a browser without installing software.
* '''Versioning:''' Maintaining previous versions of files for safety and recovery.
* '''Permissions:''' Controlling which users can view, edit, or share files.

== Main Uses ==

* Upload and share project files with team members
* Synchronize files across desktop, mobile, and web clients
* Access files remotely from anywhere
* Maintain organized and versioned project directories

== Why It Matters ==

* Ensures team members have access to the latest files
* Reduces risk of data loss or duplication
* Facilitates collaboration across multiple devices
* Centralizes project file management

== When You Will Use It ==

* Uploading or downloading lab documents and datasets
* Sharing files with colleagues
* Accessing files while working remotely
* Collaborating on shared documents

== Good Practices ==

* Organize files into clearly named folders
* Set appropriate permissions for sharing
* Regularly back up important files
* Avoid keeping multiple conflicting file versions

Fichier:Obsidian Graph.png

2026-03-23T12:24:47Z

Pierre.demangel :

JupyterLab

2026-03-23T11:18:47Z

Pierre.demangel : Add Screenshots

[https://jupyter.org/install Download link]

[https://jupyter.neurethic.com/ Web link]

[https://jupyterlab.readthedocs.io/en/latest/ User guide]

[[Fichier:JupyterLab_Accueil.png|vignette|JupyterLab Homepage]]

== Overview ==

'''JupyterLab''' is an interactive development environment used to create, run, and manage computational work, mainly in [[Python]].

It provides access to notebooks, terminals, and files through a web interface.

== Getting Started ==

# Access the JupyterLab web interface or install it locally
# Log in to the [https://jupyter.neurethic.com/ neurethic server] if required
# Navigate the file system using the interface
# Open or create notebooks and other files
# Select the appropriate kernel and start working

== Key Concepts ==

* '''Workspace:''' The interface where you organize notebooks, files, and tools.
* '''Notebook integration:''' JupyterLab allows you to create and edit notebook files (.ipynb).
* '''Kernel:''' The engine that executes code (e.g., [[Python]]).
* '''Remote server:''' A machine that runs computations remotely.
* '''File browser:''' Interface to manage project files and directories.

[[Fichier: JupyterLab_Notebook.png|vignette|A Jupyter Notebook inside JupyterLab]]

== Main Uses ==

* Access and use remote computing resources
* Create and manage [[Jupyter Notebook|Jupyter Notebooks]]
* Run [[Python]] scripts and analyses
* Organize project files and workflows

== Why It Matters ==

* Provides a unified environment for development and computation
* Enables the use of powerful remote machines
* Centralizes files, notebooks, and tools in one interface
* Supports reproducible and organized workflows

== When You Will Use It ==

* Accessing the lab’s computational resources
* Creating or editing notebooks
* Running data analysis or heavy computations
* Managing project files remotely

== Good Practices ==

* Keep files and folders well organized
* Use clear naming conventions for notebooks and scripts
* Shut down unused kernels to free resources
* Regularly save your work

== Tutorials ==

* [https://www.youtube.com/watch?v=5pf0_bpNbkw Jupyter Notebook Complete Beginner Guide - From Jupyter to JupyterLab, Google Colab and Kaggle!]